Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs750814369
rs750814369
0.010 GeneticVariation BEFREE We found that the variant genotypes of p21 Ser31Arg and p27 C-79T were individually associated with a significantly increased risk of HCC, but no associations were observed for other variant genotypes. 23034899

2013

dbSNP: rs6940552
rs6940552
0.020 GeneticVariation BEFREE We designed a case-control study of 1300 HBV-positive HCC patients, 1344 HBV persistent carriers and, 1344 HBV natural clearance subjects to test the associations of three ZNRD1 eQTLs SNPs (rs3757328, rs6940552 and, rs9261204) in ZNRD1-AS1 with the risk of both chronic HBV infection and HCC. 25110835

2015

dbSNP: rs6940552
rs6940552
0.020 GeneticVariation BEFREE We found consistently significant associations between the ZNRD1-AS1 rs6940552 and rs9261204 SNPs with an increased risk of HCC (additive genetic model: adjusted OR = 1.16, 95% CI = 1.03-1.32 for rs6940552; adjusted OR =1.20, 95% CI = 1.06-1.35 for rs9261204) and found a borderline association between rs3757328 and HCC risk. 27286450

2016

dbSNP: rs9261204
rs9261204
0.020 GeneticVariation BEFREE We found consistently significant associations between the ZNRD1-AS1 rs6940552 and rs9261204 SNPs with an increased risk of HCC (additive genetic model: adjusted OR = 1.16, 95% CI = 1.03-1.32 for rs6940552; adjusted OR =1.20, 95% CI = 1.06-1.35 for rs9261204) and found a borderline association between rs3757328 and HCC risk. 27286450

2016

dbSNP: rs9261204
rs9261204
0.020 GeneticVariation BEFREE We designed a case-control study of 1300 HBV-positive HCC patients, 1344 HBV persistent carriers and, 1344 HBV natural clearance subjects to test the associations of three ZNRD1 eQTLs SNPs (rs3757328, rs6940552 and, rs9261204) in ZNRD1-AS1 with the risk of both chronic HBV infection and HCC. 25110835

2015

dbSNP: rs3757328
rs3757328
0.020 GeneticVariation BEFREE We found consistently significant associations between the ZNRD1-AS1 rs6940552 and rs9261204 SNPs with an increased risk of HCC (additive genetic model: adjusted OR = 1.16, 95% CI = 1.03-1.32 for rs6940552; adjusted OR =1.20, 95% CI = 1.06-1.35 for rs9261204) and found a borderline association between rs3757328 and HCC risk. 27286450

2016

dbSNP: rs3757328
rs3757328
0.020 GeneticVariation BEFREE Logistic regression analyses in additive genetic model showed that variant alleles of all the three SNPs increased host HCC risk, whereas variant allele of rs3757328 was associated with HBV clearance. 25110835

2015

dbSNP: rs132770
rs132770
0.010 GeneticVariation BEFREE Firstly, the associations of XRCC6 promoter T-991C (rs5751129), promoter G-57C (rs2267437), promoter A-31G (rs132770), and intron-3 (rs132774) polymorphisms with HCC risk in this Taiwanese population were evaluated. 23393345

2013

dbSNP: rs2267437
rs2267437
0.010 GeneticVariation BEFREE Firstly, the associations of XRCC6 promoter T-991C (rs5751129), promoter G-57C (rs2267437), promoter A-31G (rs132770), and intron-3 (rs132774) polymorphisms with HCC risk in this Taiwanese population were evaluated. 23393345

2013

dbSNP: rs5751129
rs5751129
0.010 GeneticVariation BEFREE Firstly, the associations of XRCC6 promoter T-991C (rs5751129), promoter G-57C (rs2267437), promoter A-31G (rs132770), and intron-3 (rs132774) polymorphisms with HCC risk in this Taiwanese population were evaluated. 23393345

2013

dbSNP: rs132774
rs132774
0.010 GeneticVariation BEFREE Firstly, the associations of XRCC6 promoter T-991C (rs5751129), promoter G-57C (rs2267437), promoter A-31G (rs132770), and intron-3 (rs132774) polymorphisms with HCC risk in this Taiwanese population were evaluated. 23393345

2013

dbSNP: rs16855458
rs16855458
0.010 GeneticVariation BEFREE We found that a significantly reduced risk for HCC was associated with XRCC5 rs16855458 [odds ratio (OR)=0.59; 95% confidence interval (CI)=0.43-0.81; CA+AA versus CC] and a significantly increased risk for HCC was associated with XRCC5 rs9288516 (OR=2.02; 95% CI=1.42-2.86; TA+AA versus TT) even after Bonferroni correction (Pcorrected=0.026 and 0.002, respectively). 21304054

2011

dbSNP: rs80309960
rs80309960
0.010 GeneticVariation BEFREE We investigated the role of genetic polymorphisms at XRCC4 codon 247 (rs3734091, XRCC4P) and XRCC5 codon 180 (rs80309960, XRCC5P) in liver cancer (hepatocellular carcinoma) caused by aflatoxin B1 (AFB1). 23788213

2013

dbSNP: rs9288516
rs9288516
0.010 GeneticVariation BEFREE We found that a significantly reduced risk for HCC was associated with XRCC5 rs16855458 [odds ratio (OR)=0.59; 95% confidence interval (CI)=0.43-0.81; CA+AA versus CC] and a significantly increased risk for HCC was associated with XRCC5 rs9288516 (OR=2.02; 95% CI=1.42-2.86; TA+AA versus TT) even after Bonferroni correction (Pcorrected=0.026 and 0.002, respectively). 21304054

2011

dbSNP: rs1805377
rs1805377
0.020 GeneticVariation BEFREE The SNP of XRCC4 rs1805377 was significantly associated with decreased risk of HCC development (OR, 0.592; p=0.028) and improved overall survival of patients with HCC (median survival time (MST) of 48, 72, and 89 months for the AA, AG, and GG genotypes, respectively; p=0.044). 22659345

2012

dbSNP: rs1805377
rs1805377
0.020 GeneticVariation BEFREE With TaqMan real-time PCR, the results showed that no significant association between XRCC4 (rs1</span>805377) and ATF6 (rs2070150) and risk of HCC in the Thai population. 26925648

2016

dbSNP: rs28383151
rs28383151
0.010 GeneticVariation BEFREE These individuals with the genotypes of rs283</span>83151 A alleles (rs28383151-GA/AA), compared with the homozygote of rs28383151 G alleles (rs28383151-GG), faced increasing risk of HCC (odds ratio [OR]: 2.17; 95% confidence interval: 1.77-2.67). 23390017

2013

dbSNP: rs3734091
rs3734091
0.010 GeneticVariation BEFREE We investigated the role of genetic polymorphisms at XRCC4 codon 247 (rs3734091, XRCC4P) and XRCC5 codon 180 (rs80309960, XRCC5P) in liver cancer (hepatocellular carcinoma) caused by aflatoxin B1 (AFB1). 23788213

2013

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE On univariate analysis, a statistically significant association was found between risk of HCC and XRCC1 399Arg/Gln genotype (odd ratio [OR] = 1.88; 95% CI, 1.04-3.43), which was confirmed after adjusting by sex (OR = 1.94; 95% CI, 1.04-3.63). 28058700

2017

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE This meta-analysis suggests the participation of XRCC1 Arg399Gln is a genetic susceptibility for hepatocellular cancer in Asians and breast cancer in Indians. 24205095

2013

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE Our analysis suggested that the variant genotypes of the XRCC1 Arg399Gln gene were associated with a significantly increased risk of HCC in a co-dominant model (Arg/Gln vs. Arg/Arg, odd ratios [OR] 1.39, 95 % confidence interval [CI] 1.08-1.79; Gln/Gln vs. Arg/Arg, OR 1.26, 95 % CI 1.04-1.52) and a dominant model (Arg/Gln + Gln/Gln vs. Arg/Arg OR 1.36, 95 % CI 1.07-1.72), whereas no association was observed in the recessive model (Gln/Gln vs. Arg/Gln + Arg/Arg, OR 1.05, 95 % CI 0.91-1.21). 24390232

2014

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE Interestingly, the risk for HCC was further enhanced by 35.96 (95% CI = 11.64-110.91; P < 0.001) and 5.28 times (95% CI = 2.81-9.09; P < 0.001) when the genotype Arg280His was found in association with Arg194Trp and Arg399Gln, respectively. 19194663

2009

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE The XRCC1 rs25487 polymorphisms are prognostic for HCC patients receiving TACE. 26918371

2016

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE We explored the association between 4 XRCC1 (Arg194Trp and Arg399Gln) and XPD (Asp312Asn and Lys751Gln) polymorphisms with the development and prognosis of hepatocellular carcinoma (HCC). 24938468

2014

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE The XRCC1 Arg194Trp and Arg399Gln polymorphisms are not associated with HCC risk. 22919255

2012